| Star Trek: Short Treks | 2018 | Edward Larkin | TV Show |
| Wet Hot American Summer: Ten Years Later | 2017 | Can of Vegetables / Mitch | TV Show |
| Wally's Opening Day | 2017 | Stink | TV Movie |
| All Hail King Julien: Exiled | 2017 | Fred | TV Show |
| Destiny 2 | 2017 | Radio Voice (voice) | Unknown |
| #TBT to That Time Archer Met Kingsman | 2017 | Archer (voice) | Short Film |
| Dean | 2016 | Phone Store Salesman (as Jon Benjamin) | Movie |
| People of Earth | 2016 | Officer Glimmer | TV Show |
| Hell and Back | 2015 | The Tree (voice) | Movie |
| Creative Control | 2015 | Gary Gass | Movie |
| The Jim Gaffigan Show | 2015 | Kevin | TV Show |
| The Adventures of Puss in Boots | 2015 | Baltasar | TV Show |
| Limbo | 2015 | Jim | Short Film |
| Wet Hot American Summer: First Day of Camp | 2015 | Mitch / Can of Vegetables | TV Show |
| All Over It | 2015 | Landlord | TV Show |
| Master of None | 2015 | Benjamin | TV Show |
| Difficult People | 2015 | Brian | TV Show |
| 22 Jump Street | 2014 | Mcs Coach (uncredited) | Movie |
| Last Week Tonight with John Oliver | 2014 | The Blank Void / Blank Void / Lawyer / ... | TV Show |
| Jason Nash Is Married | 2014 | Dennis | Movie |
| All Hail King Julien | 2014 | Fred the Giant Scorpion / Fred | TV Show |
| Bob's Burgers | 2011 | Bob Belcher / Jimmy Jr. / Ms. LaBonz / ... | TV Show |
| Suburgatory | 2011 | Tabitha | TV Show |
| Soul Quest Overdrive | 2011 | Mortimer | TV Show |
| The Heart, She Holler | 2011 | | TV Show |
| Conan | 2010 | Sterling Archer | TV Show |
| Ugly Americans | 2010 | Dick | TV Show |
| Important Things with Demetri Martin | 2009 | Various / Uncle Ted / Cool Dad 2 / ... | TV Show |
| Michael & Michael Have Issues | 2009 | Larry | TV Show |
| Parks and Recreation | 2009 | Scott Braddock | TV Show |
| Archer | 2009 | Sterling Archer / Bob Belcher | TV Show |
| Titan Maximum | 2009 | Tap Banister | TV Show |
| The Toe Tactic | 2008 | Police Officer | Movie |
| Turbocharge: The Unauthorized Story of The Cars | 2008 | Elliott Roberts | Movie |
| Aqua Teen Hunger Force Colon Movie Film for Theaters | 2007 | CIA Agent #1 (voice, as Jon 'Big Jon' Benjamin) | Movie |
| Puberty: The Movie | 2007 | The Torah / Uncle Irving | Movie |
| The Ten | 2007 | Lying Rhino (voice) | Movie |
| Human Giant | 2007 | David Chandler / Jeff Donovan / Hard_abs05 / ... | TV Show |
| WordGirl | 2007 | Jewelry Store Clerk / Museum Curator / Reginald / ... | TV Show |
| Assy McGee | 2006 | Mayor / Various / Choir Member / ... | TV Show |
| Freak Show | 2006 | Tuck / Helen Hartsdale / Various | TV Show |
| American Dad! | 2005 | Talking Cabbage | TV Show |
| Lucy: The Daughter of the Devil | 2005 | Satan / Special Father #1 | TV Show |
| Sunday Pants | 2005 | | TV Show |
| New York Minute | 2004 | I Love NY Vendor (as Jon Benjamin) | Movie |
| Pilot Season | 2004 | Ken Fold | TV Show |
| Cheap Seats: Without Ron Parker | 2004 | Rabbi Marc Shalowitz / Gene Stapleton | TV Show |
| O'Grady | 2004 | Iris / Kevin Harnisch / Phillip DeMorio / ... | TV Show |
| Rescue Me | 2004 | Gary | TV Show |
| Temptation | 2003 | Kevin | Movie |
| The Venture Bros. | 2003 | The Master | TV Show |
| Beat Cops | 2003 | Hank | TV Movie |
| Martin & Orloff | 2002 | Keith (as Jon Benjamin) | Movie |
| Saddle Rash | 2002 | Gummy / Tommy Morgan (voice) | TV Movie |
| Borrowing Saffron | 2002 | Ron | Short Film |
| Not Another Teen Movie | 2001 | Trainer (as Jon Benjamin) | Movie |
| Wet Hot American Summer | 2001 | Can of Vegetables (voice, as Jon Benjamin) | Movie |
| Happy Accidents | 2000 | Reveler #1 (as Jon Benjamin) | Movie |
| Aqua Teen Hunger Force | 2000 | Mothmonsterman / Don Shake / Mortimer Mango / ... | TV Show |
| Puppet | 1999 | City Hall Clerk | Movie |
| Who's the Caboose? | 1999 | Ken Fold | Movie |
| Family Guy | 1999 | Carl / Bob Belcher / Carl as Yoda / ... | TV Show |
| Home Movies | 1999 | Jason Penopolis / Coach John McGuirk / Perry / ... | TV Show |
| The Dick & Paula Celebrity Special | 1999 | Jack / Lewis Merriweather / Dr. Joseph Guillotine / ... | TV Show |
| Next Stop Wonderland | 1998 | Eric | Movie |
| Sex and the City | 1998 | Jeff | TV Show |
| Upright Citizens Brigade | 1998 | | TV Show |
| Science Court | 1997 | Professor Nick Parsons / Jack Jenkins / I.M. Richman / ... | TV Show |
| The Jenny McCarthy Show | 1997 | Various | TV Show |
| Dr. Katz, Professional Therapist | 1995 | Ben Katz / Roger | TV Show |
| Understanding | 1995 | Quark | TV Show |
| Late Night with Conan O'Brien | 1993 | Cut Fan / Johnny Airhorn / Devil | TV Show |
| The Simpsons | 1989 | Bob Belcher | TV Show |
| The Pox Show | | Satan | TV Show |
| The Demons of Dorian Gunn | | Wormwood | TV Movie |
